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Publications

Selected Publications (First/co-first author research papers)
(*: Co-first author)
1. Li J, Aaron L, Antonella F.M. Dost, Samuel P. Rowbotham, Carla F. Kim (2022). Single-cell multi-omic dissection on lung cancer organoids reveals regulatory programs underlying cancer cell plasticity. (In preparation)
2. Li J*, Wang R*, Zhou X*, Wang W*, Gao S, Mao Y, Wu X, Guo L, Liu H, Wen L, Fu W, Tang F. (2019). Single cell transcriptomic and genomic profiling of carcinogenesis in patients with familial adenomatous polyposis. Gut, PMID: 31744909.  
3. Wang R*, Li J*, Zhou X*, Mao Y*, Wang W*, Gao S*, Wang W, Gao Y, Chen K, Yu S, Wu X, Wen L, Ge H, Fu W, Tang F. (2022). Single-cell genomic and transcriptomic landscapes of primary and metastatic colorectal cancer tumors. Genome Medicine, PMID: 35974387
4. Gao S*, Yan L*, Wang R*, Li J*, Yong J, Zhou X, Wei Y, Wu X, Wang X, Fan X, Yan J, Zhi X, Gao Y, Guo H, Jin X, Wang W, Mao Y, Wang F, Wen L, Fu W, Ge H, Qiao J, Tang F. (2018). Tracing the temporal-spatial transcriptome landscapes of the human fetal digestive tract using single-cell RNA- sequencing. Nature Cell Biology, PMID: 30038257. 
5. Guo F*, Li L*, Li J*, Wu X, Hu B, Zhu P, Wen L, Tang F. (2017). Single-cell multi-omics sequencing of mouse early embryos and embryonic stem cells. Cell Research, PMID: 28621329.
 
Other publications (Contributing-author papers)  
1. Wang R, Mao Y, Wang W, Zhou X, Wang W, Gao S, Li J, Wen L, Fu W, Tang F. (2022). Systematic evaluation of colorectal cancer organoid system by single-cell RNA-Seq analysis. Genome Biology, PMID: 35484598.
2. Cui Y, Zheng Y, Liu X, Yan L, Fan X, Yong J, Hu Y, Dong J, Li Q, Wu X, Gao S, Li J, Wen L, Qiao J, Tang F. (2019). Single-Cell Transcriptome Analysis Maps the Developmental Track of the Human Heart. Cell Reports, PMID: 30759401.
3. Li L, Guo F, Gao Y, Ren Y, Yuan P, Yan L, Li R, Lian Y, Li J, Hu B, Gao J, Wen L, Tang F, Qiao J. (2018). Single-cell multi-omics sequencing of human early embryos. Nature Cell Biology, PMID: 29915357.
4. Bao S, Tang WW, Wu B, Kim S, Li J, Li L, Kobayashi T, Lee C, Chen Y, Wei M, Li S, Dietmann S, Tang F, Li X, Surani MA. (2018). Derivation of hypermethylated pluripotent embryonic stem cells with high potency. Cell Research, PMID: 29076502.
5. Guo F, Yan L, Guo H, Li L, Hu B, Zhao Y, Yong J, Hu Y, Wang X, Wei Y, Wang W, Li R, Yan J, Zhi X, Zhang Y, Jin H, Zhang W, Hou Y, Zhu P, Li J, Zhang L, Liu S, Ren Y, Zhu X, Wen L, Gao YQ, Tang F, Qiao J. (2015). The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ Cells. Cell, PMID: 26046443.

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Li Lab @ Sir Run Run Shaw Hospital, Zhejiang University